| Player | Overall | First | Last |
| (Mocenok/Slovan Duslo Sala/Rimavská Sobota/Spartak Trnava/Zlaté Moravce) | 44 | (2) | 16 | (1) | 14 | |
| Oravec (Artmedia) | 16 | | 7 | | 3 | |
| Sesták (MSK Zilina) | 15 | (3) | 2 | | 7 | (1) |
| Masaryk (Slovan Bratislava) | 14 | (4) | 5 | (1) | 2 | |
| Nemec (MSK Zilina) | 14 | | 8 | | 3 | |
| Vrsic (MSK Zilina) | 14 | | 3 | | 5 | |
| Styvár (AS Trencín/MSK Zilina) | 13 | (1) | 2 | | 4 | (1) |
| Rák (Ruzomberok/FC Nitra) | 12 | | 6 | | 2 | |
| Porázik (MSK Zilina) | 12 | | 3 | | 1 | |
| Jez (MSK Zilina) | 10 | (2) | 5 | (1) | 2 | (1) |
| Kiska (MFK Dubnica) | 10 | | 3 | | 3 | |
| Filo (MFK Dubnica) | 10 | | 3 | | 1 | |
| Halenár (Artmedia) | 10 | | 2 | | 4 | |
| Czinege (AS Trencín) | 9 | (3) | 3 | (2) | 3 | (1) |
| Lietava (Banská Bystrica) | 9 | | 4 | | 0 | |
| Reiter (Artmedia) | 8 | (1) | 5 | | 2 | (1) |
| Bazík (Banská Bystrica) | 7 | (1) | 2 | | 1 | |
| Kriss (Spartak Trnava) | 7 | (1) | 1 | | 5 | (1) |
| Tomcák (Ruzomberok/Spartak Trnava) | 7 | | 4 | | 3 | |
| Devátý (MSK Zilina) | 7 | | 4 | | 0 | |
| Kolbas (MFK Kosice) | 7 | | 3 | | 2 | |
| Nezmar (Ruzomberok) | 7 | | 3 | | 0 | |
| Kozuch (Spartak Trnava) | 7 | | 2 | | 1 | |
| Takác (Senec) | 7 | | 1 | | 1 | |
| Kunzo (Inter Bratislava) | 6 | (2) | 5 | (2) | 1 | |
| Hesek (FC Nitra) | 6 | | 2 | | 2 | |
| Jurco (MFK Kosice) | 6 | | 2 | | 2 | |
| Vomácka (MSK Zilina) | 6 | | 1 | | 2 | |
| Cisovský (Artmedia) | 6 | | 1 | | 1 | |
| Medved (Banská Bystrica) | 5 | | 3 | | 1 | |
| Moughfire (Senec) | 5 | | 2 | | 2 | |
Superliga 2006/07